STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114450309Vasoactive intestinal polypeptide receptor-like. (446 aa)    
Predicted Functional Partners:
vip
Vasoactive intestinal peptide.
    
 0.920
LOC114449465
Glucagon family neuropeptides-like.
    
 0.861
ADCYAP1
Adenylate cyclase activating polypeptide 1.
    
 0.861
ENSPRNP00000015041
annotation not available
    
 0.834
ghrh
Growth hormone releasing hormone.
    
 0.814
ENSPRNP00000027149
annotation not available
    
 0.809
LOC114438237
Guanine nucleotide-binding protein G(s) subunit alpha.
    
 0.809
gnal
G protein subunit alpha L.
    
 0.809
LOC114435680
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like.
    
  0.801
gnb1
G protein subunit beta 1.
    
  0.801
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.