STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114436316Microphthalmia-associated transcription factor-like. (483 aa)    
Predicted Functional Partners:
tfeb
Transcription factor EB.
  
 
0.933
LOC114439726
Mitogen-activated protein kinase 1-like.
    
 0.848
mapk1
Mitogen-activated protein kinase 1.
    
 0.848
tfe3
Transcription factor binding to IGHM enhancer 3.
  
  
0.821
LOC114438372
Transcription factor E3-like.
  
  
0.818
MITF
Microphthalmia-associated transcription factor-like.
  
  
0.816
mtor
Mechanistic target of rapamycin kinase.
    
 
 0.683
YWHAB
14-3-3 protein beta/alpha-1-like.
    
 0.652
ywhaq
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta.
    
 0.652
ywhaz
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta.
    
 0.652
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.