STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114450628Leucine-rich repeat and fibronectin type-III domain-containing protein 4-like. (980 aa)    
Predicted Functional Partners:
ENSPRNP00000006976
Netrin g1a.
    
 0.845
ENSPRNP00000055352
Vav 3 guanine nucleotide exchange factor b.
    
 0.845
NTNG2
Netrin G2.
    
 0.755
ntng2
Netrin G2.
    
 0.755
ENSPRNP00000005003
annotation not available
    
  0.719
ENSPRNP00000005061
annotation not available
    
  0.719
ENSPRNP00000017048
annotation not available
    
  0.719
LOC114432604
Adhesion G protein-coupled receptor L1-like.
    
  0.719
LOC114449530
Adhesion G protein-coupled receptor L2-like.
    
  0.719
LOC114431992
Adhesion G protein-coupled receptor L3-like.
    
  0.719
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.