STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000038317Si:ch73-368j24.1. (93 aa)    
Predicted Functional Partners:
hat1
Histone acetyltransferase 1.
    
 0.878
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.844
arid4a
AT-rich interaction domain 4A.
    
 0.830
ENSPRNP00000027756
Translocase of outer mitochondrial membrane 20.
    
 0.830
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
 0.828
LOC114447499
Core histone macro-H2A.2.
   
 0.822
LOC114445775
Core histone macro-H2A.1.
   
 0.822
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.821
rps27a
Ribosomal protein S27a.
   
 0.820
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.810
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.