STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNMTHistamine N-methyltransferase A-like. (297 aa)    
Predicted Functional Partners:
aoc1
Amine oxidase copper containing 1.
     
 0.866
LOC114426721
Amine oxidase [flavin-containing].
   
 
 0.847
LOC114443431
Probable flavin-containing monoamine oxidase A.
   
 
 0.845
hdc
Histidine decarboxylase.
     
 0.807
ddc
Dopa decarboxylase.
     
 0.807
LOC114440398
Primary amine oxidase, liver isozyme-like.
     
 0.805
LOC114448374
Cytosolic non-specific dipeptidase-like.
     
 0.799
CNDP2
Cytosolic non-specific dipeptidase-like.
     
 0.799
nubp2
Nucleotide binding protein 2.
     
 0.777
nubp1
Nucleotide binding protein 1.
     
 0.777
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.