STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBL1XR1Transducin beta like 1 X-linked receptor 1. (537 aa)    
Predicted Functional Partners:
kmt2e
Lysine methyltransferase 2E.
    
 0.973
ctnnb1
Catenin beta 1.
  
 0.935
ncor2
Nuclear receptor corepressor 2.
   
 0.930
ncor1
Nuclear receptor corepressor 1.
   
 0.930
hdac3
Histone deacetylase 3.
   
 0.912
phf20
PHD finger protein 20.
    
 0.908
LOC114453840
Catenin beta-1-like.
  
 0.894
sirt1
Sirtuin 1.
   
 0.893
ENSPRNP00000010246
Histone deacetylase 8.
   
 0.883
LOC114428135
Probable histone deacetylase 1-B.
   
 0.883
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.