STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114441595Cholesterol 25-hydroxylase-like protein. (271 aa)    
Predicted Functional Partners:
sqle
Squalene epoxidase.
   
 0.975
sc5d
sterol-C5-desaturase.
   
 0.969
LOC114437114
Lathosterol oxidase-like.
   
 0.969
LOC114450320
25-hydroxycholesterol 7-alpha-hydroxylase.
  
 0.967
LOC114450234
Cholesterol 7-alpha-monooxygenase.
  
 0.967
dhcr7
7-dehydrocholesterol reductase.
   
 0.948
LOC114428886
Delta(14)-sterol reductase-like.
   
 0.937
tm7sf2
Transmembrane 7 superfamily member 2.
   
 0.937
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
  
 0.935
LOC114434813
3-keto-steroid reductase-like.
   
 0.934
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.