STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pde6gPhosphodiesterase 6G. (89 aa)    
Predicted Functional Partners:
LOC114435462
Guanine nucleotide-binding protein G(t) subunit alpha-1.
   
 0.991
LOC114437950
Guanine nucleotide-binding protein G(t) subunit alpha-2-like.
   
 0.989
LOC114442686
Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha-like.
   
 0.971
LOC114444106
Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta-like.
   
 0.967
pde6c
Phosphodiesterase 6C.
   
 0.959
ENSPRNP00000048590
annotation not available
   
 0.938
pde5a
Phosphodiesterase 5A.
   
 0.938
LOC114453755
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like.
    
 0.933
LOC114447022
Guanine nucleotide-binding protein G(T) subunit gamma-T1-like.
   
 
 0.927
LOC114448355
Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A-like.
   
 0.925
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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