STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABHD1Phospholipase ABHD3-like. (407 aa)    
Predicted Functional Partners:
mgll
Monoglyceride lipase.
   
 0.682
LOC114443281
1-acyl-sn-glycerol-3-phosphate acyltransferase alpha-like.
    
  0.660
lypla2
Lysophospholipase 2.
     
 0.610
lypla1
Lysophospholipase 1.
     
 0.610
sptlc1
Serine palmitoyltransferase long chain base subunit 1.
  
 
 0.531
anapc1
Anaphase promoting complex subunit 1.
     
 0.530
LOC114438714
5-aminolevulinate synthase, nonspecific, mitochondrial-like.
  
 
 0.511
ube2c
Ubiquitin conjugating enzyme E2 C.
   
 
  0.511
LOC114438960
5-aminolevulinate synthase, erythroid-specific, mitochondrial-like.
  
 
 0.511
alas1
5'-aminolevulinate synthase 1.
  
 
 0.511
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.