STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc25a16Solute carrier family 25 member 16. (320 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
   0.912
rpl14
Ribosomal protein L14.
   
 
 0.761
sdha
Succinate dehydrogenase complex flavoprotein subunit A.
     
 0.737
ENSPRNP00000036674
succinate-CoA ligase, ADP-forming, beta subunit.
     
 0.733
rps18
Ribosomal protein S18.
   
 
 0.728
rpl6
Ribosomal protein L6.
   
 
 0.719
rpl8
Ribosomal protein L8.
   
 
 0.716
rpl37a
Ribosomal protein L37a.
   
 
 0.715
rps11
Ribosomal protein S11.
   
 
 0.712
rps23
Ribosomal protein S23.
   
 
 0.710
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.