STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pigxPhosphatidylinositol glycan anchor biosynthesis class X. (243 aa)    
Predicted Functional Partners:
pigm
Phosphatidylinositol glycan anchor biosynthesis class M.
     
 0.920
pigv
Phosphatidylinositol glycan anchor biosynthesis class V.
    
 0.890
yars1
tyrosyl-tRNA synthetase 1.
  
 
 0.886
pigw
Phosphatidylinositol glycan anchor biosynthesis class W.
    
 0.877
pigb
Phosphatidylinositol glycan anchor biosynthesis class B.
     
 0.871
mtif2
Mitochondrial translational initiation factor 2.
  
 0.865
dpm2
Dolichyl-phosphate mannosyltransferase subunit 2, regulatory.
     
 0.864
eprs1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.863
mrpl15
Mitochondrial ribosomal protein L15.
   
 
 0.856
rictor
RPTOR independent companion of MTOR complex 2.
    
 0.847
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.