STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mvb12bMultivesicular body subunit 12B. (295 aa)    
Predicted Functional Partners:
vps28
VPS28 subunit of ESCRT-I.
   
 0.988
LOC114437253
Ubiquitin-conjugating enzyme E2 variant 3-like.
    
 0.984
vps37a
VPS37A subunit of ESCRT-I.
   
 0.973
vps37c
VPS37C subunit of ESCRT-I.
   
 0.967
LOC114437658
Tumor susceptibility gene 101 protein-like.
    
 0.963
ENSPRNP00000013225
Si:ch211-284f22.3.
   
 0.963
tsg101
Tumor susceptibility 101.
    
 0.963
ENSPRNP00000012388
VPS37B subunit of ESCRT-I.
   
 0.959
ENSPRNP00000015757
VPS37B subunit of ESCRT-I.
   
 0.959
tm9sf1
Transmembrane 9 superfamily member 1.
    
 0.930
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.