STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cytipCytohesin 1 interacting protein. (357 aa)    
Predicted Functional Partners:
ift57
Intraflagellar transport 57.
    
 0.777
traf3ip1
TRAF3 interacting protein 1.
    
 0.771
ift172
Intraflagellar transport 172.
    
 0.753
ift80
Intraflagellar transport 80.
    
 0.742
prkcz
Protein kinase C zeta.
    
 0.723
prkci
Protein kinase C iota.
    
 0.723
LOC114437952
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like.
    
0.716
ENSPRNP00000020901
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
 0.716
ENSPRNP00000020908
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
 0.716
ENSPRNP00000034296
annotation not available
    
 0.716
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.