STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114435305Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like. (1241 aa)    
Predicted Functional Partners:
LOC114446004
Immunoglobulin superfamily member 5-like.
    
 0.908
igsf5
Immunoglobulin superfamily member 5.
    
 0.908
ctnnb1
Catenin beta 1.
    
 0.902
rapgef2
Rap guanine nucleotide exchange factor 2.
    
 0.901
LOC114445878
Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2-like.
    
 0.848
LOC114447342
annotation not available
    
 0.848
rapgef6
Rap guanine nucleotide exchange factor 6.
    
  0.847
ENSPRNP00000053473
annotation not available
    
0.847
LOC114438342
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like.
  
  
 
0.835
LOC114449214
Partitioning defective 3 homolog.
    
 
0.811
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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