STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nusap1Nucleolar and spindle associated protein 1. (441 aa)    
Predicted Functional Partners:
dlgap5
DLG associated protein 5.
   
  
 0.965
pbk
PDZ binding kinase.
   
  
 0.952
ndc80
NDC80 kinetochore complex component.
   
  
 0.951
ube2c
Ubiquitin conjugating enzyme E2 C.
   
  
 0.948
tpx2
TPX2 microtubule nucleation factor.
   
 
 0.932
cdca8
Cell division cycle associated 8.
   
  
 0.923
bub1b
BUB1 mitotic checkpoint serine/threonine kinase B.
   
  
 0.923
cenpf
Centromere protein F.
   
  
 0.922
LOC114452309
Baculoviral IAP repeat-containing protein 5.2-like.
   
  
 0.919
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
  
 0.915
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.