STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppm1gProtein phosphatase, Mg2+/Mn2+ dependent 1G. (562 aa)    
Predicted Functional Partners:
usp7
Ubiquitin specific peptidase 7.
   
 0.811
ENSPRNP00000008764
annotation not available
    
  0.703
med14
Mediator complex subunit 14.
    
  0.700
med21
Mediator complex subunit 21.
    
  0.700
med7
Mediator complex subunit 7.
    
  0.700
mapk6
Mitogen-activated protein kinase 6.
   
 0.696
usp40
Ubiquitin specific peptidase 40.
   
 0.694
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.691
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.691
LOC114441845
Mitogen-activated protein kinase 4-like.
   
 0.685
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.