STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aarsd1Putative protein PTGES3L. (401 aa)    
Predicted Functional Partners:
aars1
alanyl-tRNA synthetase 1.
   
 
 0.886
aars2
alanyl-tRNA synthetase 2, mitochondrial.
   
 
 0.886
bicral
BRD4 interacting chromatin remodeling complex associated protein like.
   
 
 0.807
bicra
BRD4 interacting chromatin remodeling complex associated protein.
   
 
 0.807
cdc23
Cell division cycle 23.
   
 
 0.807
ptges2
Prostaglandin E synthase 2.
     
 0.710
eprs1
glutamyl-prolyl-tRNA synthetase 1.
     
 0.641
yars1
tyrosyl-tRNA synthetase 1.
      
 0.602
ptges
Prostaglandin E synthase.
   
 
  0.549
mgst1
Microsomal glutathione S-transferase 1.
   
 
  0.549
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.