STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114436080Caveolin-3-like. (152 aa)    
Predicted Functional Partners:
cav2
Caveolin 2.
  
0.992
LOC114436497
Caveolin-2-like.
  
 
0.933
CALML6
Calmodulin-like protein 6.
     
 0.894
LOC114438169
Proto-oncogene tyrosine-protein kinase Src.
    
 0.886
SRC
Proto-oncogene tyrosine-protein kinase Src-like.
    
 0.886
fyn
FYN proto-oncogene, Src family tyrosine kinase.
    
 0.885
LOC114427321
Tyrosine-protein kinase fyna.
    
 0.883
ENSPRNP00000006651
annotation not available
    
 0.869
LOC114440880
Nitric oxide synthase, brain-like.
    
 0.869
LOC114450169
Integrin beta-1-like.
     
 0.862
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.