STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114452309Baculoviral IAP repeat-containing protein 5.2-like. (141 aa)    
Predicted Functional Partners:
cdca8
Cell division cycle associated 8.
   
 0.999
incenp
Inner centromere protein.
   
 0.998
aurka
Aurora kinase A.
   
 0.987
LOC114442548
Aurora kinase B-like.
   
 0.987
ube2c
Ubiquitin conjugating enzyme E2 C.
   
 0.986
pbk
PDZ binding kinase.
   
 0.981
mad2l1
Mitotic arrest deficient 2 like 1.
   
 
 0.979
bub1b
BUB1 mitotic checkpoint serine/threonine kinase B.
   
 0.976
diablo
Diablo IAP-binding mitochondrial protein.
    
 0.975
LOC114444999
Diablo homolog, mitochondrial-like.
    
 0.975
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.