STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thbs3Thrombospondin 3. (951 aa)    
Predicted Functional Partners:
itgb4
Integrin subunit beta 4.
   
 0.868
itgb5
Integrin subunit beta 5.
    
 0.861
ENSPRNP00000022529
Integrin, beta 8.
    
 0.858
itgb6
Integrin subunit beta 6.
    
 0.858
LOC114450169
Integrin beta-1-like.
    
 0.857
itgb1
Integrin subunit beta 1.
    
 0.857
ITGA7
Integrin subunit alpha 7.
    
 0.853
cd36
CD36 molecule.
    
 0.853
itga2
Integrin subunit alpha 2.
    
 0.848
itga1
Integrin subunit alpha 1.
    
 0.848
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.