STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114431353Ephrin type-B receptor 4-like. (1011 aa)    
Predicted Functional Partners:
efnb1
Ephrin B1.
   
 0.824
EFNA5
Ephrin A5.
   
 0.815
LOC114444037
ephrin-A5b-like.
   
 0.815
efnb2
Ephrin B2.
   
 0.810
LOC114450985
ephrin-B2-like.
   
 0.804
ENSPRNP00000056396
ephrin-A2a.
   
 0.791
rasa1
RAS p21 protein activator 1.
   
 0.754
efna4
Ephrin A4.
   
 0.747
LOC114433536
ephrin-B2a-like.
   
 0.743
LOC114431944
ephrin-A1-like.
   
 0.732
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.