STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sigirrSingle Ig and TIR domain containing. (521 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.861
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.800
LOC114443643
Interleukin-1 beta-like.
     
 0.729
myd88
MYD88 innate immune signal transduction adaptor.
    
 0.706
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.704
LOC114453748
ranBP2-like and GRIP domain-containing protein 3.
    
 0.702
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.702
ENSPRNP00000012799
annotation not available
    
  0.687
RIMS2
Regulating synaptic membrane exocytosis 2.
    
  0.687
nup107
Nucleoporin 107.
   
 0.679
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.