STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114431575Activity-dependent neuroprotector homeobox protein 2-like. (990 aa)    
Predicted Functional Partners:
mphosph8
M-phase phosphoprotein 8.
   
 
 0.617
LOC114431828
Ribosomal RNA processing protein 36 homolog.
      
 0.537
ahctf1
AT-hook containing transcription factor 1.
      
 0.530
znf407
Zinc finger protein 407.
   
 
 0.527
CDYL2
Chromodomain Y like 2.
   
 
 0.501
cdyl
Chromodomain Y like.
   
 
 0.501
ctdp1
CTD phosphatase subunit 1.
   
  
 0.488
CBX1
Chromobox 1.
   
 
 0.463
CBX1-2
Chromobox 1.
   
 
 0.463
cbx3
Chromobox 3.
   
 
 0.463
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.