STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000050713Laminin, alpha 5. (1635 aa)    
Predicted Functional Partners:
LOC114444048
Laminin subunit gamma-3-like.
   
0.920
LOC114449577
Laminin subunit gamma-2-like.
   
0.920
lamc1
Laminin subunit gamma 1.
   
0.920
ITGA7
Integrin subunit alpha 7.
    
 0.892
itgb4
Integrin subunit beta 4.
   
 0.882
LOC114430474
Laminin subunit beta-1-like.
   
0.882
lamb2
Laminin subunit beta 2.
   
0.882
itga8
Integrin subunit alpha 8.
    
 0.873
itga4
Integrin subunit alpha 4.
    
 0.873
itga9
Integrin subunit alpha 9.
    
 0.873
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.