STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114450357Zona pellucida sperm-binding protein 4-like. (522 aa)    
Predicted Functional Partners:
LOC114437260
Zona pellucida sperm-binding protein 3-like.
   
 0.805
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.688
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.676
ENSPRNP00000051160
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.661
LOC114435954
Macrophage-stimulating protein receptor-like.
    
  0.656
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.656
mst1r
Macrophage stimulating 1 receptor.
    
  0.656
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.649
ripk4
Receptor interacting serine/threonine kinase 4.
   
  0.645
nxf1
Nuclear RNA export factor 1.
    
  0.620
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.