STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
p3h2Prolyl 3-hydroxylase 2. (682 aa)    
Predicted Functional Partners:
ppib
Peptidylprolyl isomerase B.
   
 0.808
P3H4
Endoplasmic reticulum protein SC65-like.
   
0.792
p3h4
Prolyl 3-hydroxylase family member 4 (inactive).
   
0.792
crtap
Cartilage associated protein.
   
0.792
ppic
Peptidylprolyl isomerase C.
   
 0.754
LOC114437390
Protein disulfide-isomerase-like.
   
 0.642
p4hb
Prolyl 4-hydroxylase subunit beta.
   
 0.642
ENSPRNP00000035948
annotation not available
    
 0.631
ENSPRNP00000005691
annotation not available
    
 0.601
LOC114426045
Collagen alpha-2(VI) chain-like.
   
 0.587
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.