STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpr153G protein-coupled receptor 153. (671 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.871
ENSPRNP00000056581
annotation not available
   
 0.773
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.767
tprg1l
Tumor protein p63 regulated 1 like.
    
 0.752
LOC114434910
Tumor protein p63-regulated gene 1-like protein.
    
 0.752
sf3b1
Splicing factor 3b subunit 1.
   
 0.738
sf3b2
Splicing factor 3b subunit 2.
   
 0.729
ddx51
DEAD-box helicase 51.
   
 0.728
rps6
Ribosomal protein S6.
    
 0.723
sf3b3
Splicing factor 3b subunit 3.
    
 0.720
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.