STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
syt7Synaptotagmin 7. (480 aa)    
Predicted Functional Partners:
LOC114432947
Intersectin-2-like.
     
 0.679
ENSPRNP00000041654
annotation not available
     
 0.679
ENSPRNP00000012799
annotation not available
     
0.669
RIMS2
Regulating synaptic membrane exocytosis 2.
     
0.669
snap23
Synaptosome associated protein 23.
   
 0.649
snap25
Synaptosome associated protein 25.
   
 0.648
vamp7
Vesicle associated membrane protein 7.
     
 0.641
LOC114434177
Ras-related protein Rab-3B-like.
   
 0.579
LOC114440412
Ras-related protein Rab-3D-like.
   
 0.579
LOC114435937
Ras-related protein Rab-3D-like.
   
 0.579
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.