STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
virmaVir like m6A methyltransferase associated. (1817 aa)    
Predicted Functional Partners:
wtap
WT1 associated protein.
    
 0.999
zc3h13
Zinc finger CCCH-type containing 13.
   
 0.998
cbll1
Cbl proto-oncogene like 1.
    
 0.996
mettl3
Methyltransferase like 3.
    
 0.987
mettl14
Methyltransferase like 14.
    
 0.978
thoc2
THO complex 2.
   
 0.962
rbm15
RNA binding motif protein 15.
    
 0.921
LOC114451132
Putative RNA-binding protein 15B.
    
 0.881
RBM15B
Putative RNA-binding protein 15B.
    
 0.881
ENSPRNP00000043450
annotation not available
    
 0.881
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.