STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNTN1Contactin-1a-like. (1024 aa)    
Predicted Functional Partners:
ENSPRNP00000011076
Neurofascin homolog (chicken) a.
    
0.927
LOC114437954
Neurofascin-like.
    
0.927
cntnap1
Contactin associated protein 1.
   
 0.899
ENSPRNP00000016028
annotation not available
    
0.878
LOC114451714
Neuronal cell adhesion molecule-like.
    
0.878
LOC114438089
Neural cell adhesion molecule L1.1-like.
    
0.768
LOC114438069
Neural cell adhesion molecule L1-like protein.
    
0.768
chl1
Cell adhesion molecule L1 like.
    
0.768
LOC114438767
Neural cell adhesion molecule L1-like.
    
0.768
ptprg
Protein tyrosine phosphatase receptor type G.
    
 0.732
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.