STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114444006Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like. (460 aa)    
Predicted Functional Partners:
LOC114444787
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
   
 0.988
LOC114442248
Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform.
   
 0.965
ppp2ca
Protein phosphatase 2 catalytic subunit alpha.
   
 0.965
LOC114441028
Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform-like.
   
 0.965
ppp4r1
Protein phosphatase 4 regulatory subunit 1.
    
 0.945
ppp2r2d
Protein phosphatase 2 regulatory subunit Bdelta.
  
 
0.943
espl1
Extra spindle pole bodies like 1, separase.
    
 
 0.924
LOC114427085
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform.
    
 0.921
ppp2r5a
Protein phosphatase 2 regulatory subunit B'alpha.
    
 0.921
ppp2r5b
Protein phosphatase 2 regulatory subunit B'beta.
    
 0.920
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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