STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000056441annotation not available (269 aa)    
Predicted Functional Partners:
apaf1
Apoptotic peptidase activating factor 1.
    
 0.940
appl2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 0.857
appl1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 0.857
birc6
Baculoviral IAP repeat containing 6.
   
 0.832
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.715
ripk4
Receptor interacting serine/threonine kinase 4.
    
 0.689
tradd
TNFRSF1A associated via death domain.
    
 0.688
tpx2
TPX2 microtubule nucleation factor.
    
 0.680
LOC114427566
cystatin-B-like.
    
 0.680
LOC114447416
cystatin-C-like.
    
 0.680
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.