STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114436008Melanocyte protein PMEL-like. (820 aa)    
Predicted Functional Partners:
mlana
melan-A.
   
  
 0.866
TYR
Tyrosinase-like.
   
  
 0.791
gart
annotation not available
   
  
 0.645
dct
Dopachrome tautomerase.
   
  
 0.602
tyr
Tyrosinase.
   
  
 0.573
LOC114434960
5,6-dihydroxyindole-2-carboxylic acid oxidase-like.
   
  
 0.515
LOC114450747
5,6-dihydroxyindole-2-carboxylic acid oxidase-like.
   
  
 0.515
slc24a5
Solute carrier family 24 member 5.
   
  
 0.514
LOC114435659
Uncharacterized LOC114435659.
      
 0.422
LOC114433449
GTP cyclohydrolase 1-like.
   
  
 0.404
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.