STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mettl1Methyltransferase like 1. (241 aa)    
Predicted Functional Partners:
wdr4
WD repeat domain 4.
   
 0.999
trmt61a
tRNA methyltransferase 61A.
  
 0.994
sgf29
SAGA complex associated factor 29.
    
 0.992
TADA1
Transcriptional adaptor 1.
    
 0.992
tada2a
Transcriptional adaptor 2A.
    
 0.992
trmt61b
tRNA methyltransferase 61B.
  
 0.992
sars1
seryl-tRNA synthetase 1.
   
 0.990
bud23
BUD23 rRNA methyltransferase and ribosome maturation factor.
   
 0.983
trmt11
tRNA methyltransferase 11 homolog.
   
 0.983
LOC114442737
Multifunctional methyltransferase subunit TRM112-like protein.
   
 
 0.978
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.