STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHU84670.1NADPH quinone reductase MdaB; Involved in drug resistance; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)    
Predicted Functional Partners:
OHU83218.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.600
OHU82032.1
Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.600
OHU85191.1
Alanine transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.518
OHU81353.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.489
OHU84671.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.458
OHU84014.1
Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.434
OHU81870.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.419
Your Current Organism:
Helicobacter sp. CLO3
NCBI taxonomy Id: 211
Other names: Campylobacter-like organism 3, H. sp. CLO-3, Helicobacter CLO3, Helicobacter sp. (strain CLO3), Helicobacter sp. CLO-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.