STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHU84671.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (795 aa)    
Predicted Functional Partners:
OHU82919.1
DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.795
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 0.688
OHU84045.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.607
OHU84710.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.601
OHU84561.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.578
OHU81267.1
Hypothetical protein; Hydrolyzes 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives.
   
  0.565
OHU83064.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.553
OHU81516.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.553
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.536
OHU82804.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.536
Your Current Organism:
Helicobacter sp. CLO3
NCBI taxonomy Id: 211
Other names: Campylobacter-like organism 3, H. sp. CLO-3, Helicobacter CLO3, Helicobacter sp. (strain CLO3), Helicobacter sp. CLO-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.