STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM14964.1N-acyl-D-amino-acid deacylase. (533 aa)    
Predicted Functional Partners:
SDN37334.1
Hexosaminidase.
  
  0.979
SDM14979.1
D-serine deaminase, pyridoxal phosphate-dependent.
 
   
 0.973
SDM14994.1
2-dehydro-3-deoxygluconokinase.
     0.876
SDM14950.1
gluconate:H+ symporter, GntP family.
 
     0.841
SDM22071.1
Hexosaminidase.
  
  0.841
SDM14935.1
Protein of unknown function.
       0.651
SDM15030.1
Reactive intermediate/imine deaminase.
 
     0.651
SDM15010.1
DNA-binding transcriptional regulator, IclR family.
     0.635
SDM15043.1
Hypothetical protein.
       0.459
SDN42399.1
Amidohydrolase; Belongs to the peptidase M20A family.
 
     0.452
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.