STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM15229.1Protein of unknown function. (163 aa)    
Predicted Functional Partners:
SDN59209.1
Hypothetical protein.
  
    0.610
SDM15244.1
Peptidase_C39 like family protein.
       0.604
SDM15256.1
Uncharacterized lipoprotein YddW, UPF0748 family.
       0.516
SDN16060.1
Cytochrome c-type biogenesis protein.
   
    0.485
SDN56852.1
Cytochrome c biogenesis protein CcdA.
   
    0.485
SDM77020.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
   
 0.473
SDN20137.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
    0.456
SDN38446.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
    0.456
SDN24847.1
Hypothetical protein.
  
    0.455
SDM39259.1
ATP-binding cassette, subfamily B, IrtA.
   
    0.453
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.