STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM15603.1Xylulokinase; Belongs to the FGGY kinase family. (496 aa)    
Predicted Functional Partners:
SDM15570.1
L-fucose isomerase.
 
 
 0.907
SDN71579.1
Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.817
xylB
Xylulokinase.
 
  
 
0.787
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
  
 
 0.784
SDN32252.1
L-fuculose 1-phosphate aldolase.
 
 
  0.776
SDM15581.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
     
 0.757
SDM23940.1
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.751
SDM65817.1
L-ribulose 5-phosphate 4-epimerase.
 
 
  0.736
SDN26101.1
6-phosphogluconate dehydrogenase (decarboxylating).
  
 
  0.735
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
   
 0.731
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.