STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM15802.1Hypothetical protein. (546 aa)    
Predicted Functional Partners:
SDM16042.1
Hypothetical protein.
 
 
 0.999
SDM16092.1
Hypothetical protein.
 
 
 0.999
SDM15823.1
Conserved hypothetical phage tail region protein.
 
 
 0.998
SDM16102.1
Putative baseplate assembly protein.
 
 
 0.995
SDM16126.1
Putative baseplate assembly protein.
 
 
 0.995
SDM16021.1
Hypothetical protein.
  
 
 0.991
SDM15851.1
Hypothetical protein.
 
     0.952
SDM15898.1
Protein of unknown function.
 
     0.952
SDM15914.1
ATPase family associated with various cellular activities (AAA).
     0.952
SDM15954.1
Protein of unknown function.
 
     0.939
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.