STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM15997.1Hypothetical protein. (216 aa)    
Predicted Functional Partners:
SDM16042.1
Hypothetical protein.
 
     0.957
SDM16055.1
Hypothetical protein.
 
     0.957
SDM16092.1
Hypothetical protein.
 
     0.952
SDM16102.1
Putative baseplate assembly protein.
 
     0.952
SDM16126.1
Putative baseplate assembly protein.
 
     0.952
SDM16147.1
Hypothetical protein.
 
     0.952
SDM16158.1
Hypothetical protein.
 
     0.948
SDM16179.1
Protein of unknown function.
 
     0.937
SDM15851.1
Hypothetical protein.
 
     0.923
SDM15898.1
Protein of unknown function.
 
     0.923
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.