STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM17109.1NitT/TauT family transport system substrate-binding protein. (325 aa)    
Predicted Functional Partners:
SDM16646.1
NitT/TauT family transport system permease protein.
 
 
  0.934
SDM16662.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
  0.918
SDM16679.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.908
SDN67157.1
Signal transduction histidine kinase.
    
  0.856
SDN53971.1
NitT/TauT family transport system permease protein.
 
 
  0.841
SDM38137.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.765
SDM38120.1
NitT/TauT family transport system permease protein.
 
 
  0.762
SDM64316.1
FMN reductase.
 
 
  0.761
SDN53995.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.749
infA
Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
   
    0.732
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.