STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM17163.1Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. (711 aa)    
Predicted Functional Partners:
SDN42093.1
Chitinase.
    
 0.889
SDN14904.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.868
SDM24346.1
GtrA-like protein.
  
 
 0.859
SDM40313.1
GtrA-like protein.
  
 
 0.859
SDM20949.1
Glycosyl transferase family 2.
  
 
 0.798
SDM18561.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.797
SDN27561.1
Methyltransferase domain-containing protein.
  
 
 0.788
SDN56684.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
    
 0.788
murG
UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
    
 0.775
SDM17148.1
Hypothetical protein.
       0.773
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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