STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM17820.1Methyltransferase domain-containing protein. (256 aa)    
Predicted Functional Partners:
SDM52959.1
Amino acid adenylation domain-containing protein.
    
 0.830
SDM17841.1
Protein N-acetyltransferase, RimJ/RimL family.
 
     0.803
SDM31339.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
   
 0.715
SDM29007.1
Phosphopantetheine attachment site.
    
 0.697
SDN03352.1
Acyl transferase domain-containing protein.
    
 0.697
SDN30028.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
     
 0.683
SDN66254.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
     
 0.683
SDM17781.1
M6 family metalloprotease domain-containing protein.
       0.682
SDM17790.1
Hypothetical protein.
       0.682
SDM17809.1
Thiol-disulfide isomerase or thioredoxin.
       0.682
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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