STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM18301.13-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. (106 aa)    
Predicted Functional Partners:
SDN11632.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
 
 0.949
SDM79677.1
Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  0.904
SDN66172.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
 
  0.871
SDM83219.1
Reductase C-terminal.
 
  0.869
SDM28504.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
  0.851
SDM76695.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
  0.851
SDN06676.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
  0.851
SDM18282.1
Iron-regulated ABC transporter permease protein SufD.
 
     0.825
SDM18270.1
Iron-regulated ABC transporter membrane component SufB.
 
     0.823
SDM79718.1
Assimilatory nitrate reductase electron transfer subunit.
  
  0.823
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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