STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM18758.1Ion channel. (184 aa)    
Predicted Functional Partners:
SDM18737.1
Phospholipase_D-nuclease N-terminal.
 
     0.903
SDM32518.1
Hypothetical protein.
 
     0.738
SDM32496.1
Short C-terminal domain-containing protein.
  
     0.726
SDN72848.1
Uncharacterized membrane protein.
 
     0.644
SDM18639.1
Hypothetical protein.
 
     0.616
SDN11979.1
Inhibitor of the KinA pathway to sporulation, predicted exonuclease.
  
     0.461
SDM58628.1
Uncharacterized conserved protein, DUF2252 family.
 
     0.443
SDM18729.1
Arylsulfatase.
       0.437
SDN50923.1
Hypothetical protein.
  
     0.429
SDM18709.1
Predicted PurR-regulated permease PerM.
 
     0.426
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.