STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM21571.1DNA-binding transcriptional regulator, MarR family. (164 aa)    
Predicted Functional Partners:
SDM21553.1
Uncharacterized membrane protein.
 
     0.875
SDM21590.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
       0.705
SDN25454.1
Uncharacterized conserved protein.
  
     0.628
SDN25424.1
Uncharacterized conserved protein.
  
     0.605
SDM67855.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
  
     0.589
SDM21725.1
NACHT domain-containing protein.
  
     0.526
SDM29750.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.513
SDM34051.1
Integral membrane sensor domain MASE1.
  
     0.487
SDM21606.1
MFS transporter, DHA1 family, chloramphenicol resistance protein.
       0.447
SDM15743.1
Hypothetical protein.
  
     0.446
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.