STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM22023.1DNA-binding transcriptional regulator, FadR family. (239 aa)    
Predicted Functional Partners:
SDM22002.1
Glutamine synthetase.
 
   
 0.911
SDM21951.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
 
  0.877
SDM22034.1
Ethanolamine permease.
 
     0.834
SDM21984.1
Putative glutamine amidotransferase.
 
     0.763
SDM21966.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
 
  
  0.740
SDM21343.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
    
  0.692
SDM71773.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
  0.691
SDN17977.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.646
SDN43754.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.640
SDM69826.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.617
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.