STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM23897.1Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. (369 aa)    
Predicted Functional Partners:
SDN67157.1
Signal transduction histidine kinase.
    
 0.937
SDN19734.1
Sensor histidine kinase regulating citrate/malate metabolism.
  
 0.912
SDM34481.1
PAS domain S-box-containing protein.
    
 0.898
SDM39896.1
Glucokinase.
  
  
  0.853
SDN70387.1
PTS system N-acetylglucosamine-specific IIC component, Glc family.
   
 0.801
SDN70428.1
PTS system N-acetylglucosamine-specific IIB component, Glc family.
   
 0.801
SDN23115.1
Glucokinase.
  
     0.773
SDM88008.1
Polyphosphate glucokinase.
  
  
 0.601
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.571
SDM62716.1
PAS domain S-box-containing protein.
    
 0.568
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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