STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM24177.1Imidazolonepropionase. (400 aa)    
Predicted Functional Partners:
SDM24159.1
GAF domain-containing protein.
 
     0.902
SDM24139.1
MFS transporter, putative metabolite:H+ symporter.
 
     0.819
SDM24116.1
DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains.
 
    0.720
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
 
 0.694
SDM39552.1
Histidine ammonia-lyase.
  
  
 0.500
SDN45816.1
Histidine ammonia-lyase.
  
  
 0.500
SDM49268.1
Component of the Tol biopolymer transport system.
  
     0.413
SDN39071.1
Cytosine/adenosine deaminase.
 
  
  0.412
SDM39699.1
SnoaL-like domain-containing protein.
  
     0.406
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.